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Holiday Notification: Cayman Chemical will be closed Monday, May 28, 2012, in observance of the Memorial Day holiday. More…
Please feel free to continue placing orders via our website or via fax at 734-971-3640. You may send an email to customer service at custserv@caymanchem.com , or to technical support at techserv@caymanchem.com which we will respond to the next business day. Cayman will resume regular business hours and shipping schedules on Tuesday, May 29, 2012. Thank you for your patience and understanding.

Protein Analysis Tools

View other analysis tools

This is the Cayman Chemical Company Protein Tools page. It contains information, Excel workbooks, and other tools useful for anyone using the Cayman Chemical Protein Determination Kit.

If you have questions on the use of our tools, or feel something is missing, please contact Technical Services.

The Workbooks

Currently, Cayman Chemical uses two Excel workbooks for analyzing protein assays. Both are available for your download and use.

Download

Your downloading these files implies acceptance of the license agreement listed below and present in each workbook.

  • ProteinTriple ~ 600 Kb XLS formatted for assays performed in triplicate
  • ProteinDouble ~ 600 Kb XLS formatted for assays performed in duplicate

Trouble downloading? Right-click the link and select "Save Target As..."

These instructions are repeated on the first sheet of each workbook.

ProteinTriple worksheet screen shot
ProteinTriple Worksheet
ProteinDouble worksheet screen shot
ProteinDouble worksheet

Definition of Key Terms

Term Definition
StdX (Standards) Standards A through H made by serially diluting StdH six times. StdA is the zero-point.
Smpl# (1:#) Samples and their associated dilution factors [Dilutions must be entered in the format shown]

Workbook Sheets

Analysis
Field Explanation
LAYOUT Contains sample names and associated dilution factors
RAW DATA Data entered into the worksheet in the format defined by the LAYOUT section
CONC The concentration for each cell is calculated based on the absorbance value, constants from the polynomial fit curve (see StdCurve section), and the dilution factor from the LAYOUT section
STANDARDS The Avg and Avg2 values are calculated for each concentration value.
Samples This table is compiled from the preceding sections. It includes
  • Conc: average of the replicate concentrations from the CONC section.
  • Dilution: the dilution factor, for that sample, from the LAYOUT section
  • StdDev: the standard deviation of the replicate concentration values
  • %CV: the coefficient of variance of the replicate concentration values
  • SEM: the standard error of the mean for the replicate concentration values
STATS A, B, and C are obtained from the polynomial y = Ax2 +Bx + C fit of the calibration data.
FILENAME The filename given to the Excel workbook.
StdCurve

This is the calibration curve of the concentration standards plotted versus their absorbance values. The data are fit to a polynomial line with the general equation y = Ax2 + Bx + C.

Instructions

The worksheets were designed to be as "hands-off" as possible. The following instructions assume you have loaded your plate according to one of the plate layouts shown above, and have the data in a form that can be imported (or pasted) directly into a spreadsheet. To analyze your data:

  1. Input your sample names into the appropriate cells.
  2. Input the sample dilutions into the appropriate cells in the format shown (e.g., 1:5)
  3. Paste/type your data into the RAW DATA section (starting in cell B12) of the Analysis worksheet. Select the Values option in the Paste Special... dialog box to maintain formatting.

All concentration values, and relevant statistics, are automatically calculated. The Samples table is then filled in with the data. All averages and statistics are calculated based on all replicates for each sample. It is the responsibility of the individual researcher to decide if any data can be eliminated. Caution should be exercised, however, when doing this! Cayman Chemical has examined statistical methods to test for the presence of outliers in protein assays. We find that individual replicates are rarely flagged as outliers, and cannot be eliminated from the experiment.

Note The sole purpose of the data contained in this workbook is to demonstrate the functions of the individual spreadsheets.

Copyright and Disclaimer

Copyright © 2012 Cayman Chemical Company, Inc. All rights reserved.

Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met:

  1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer.
  2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution.

THIS SOFTWARE IS PROVIDED BY CAYMAN CHEMICAL COMPANY, INC. "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL CAYMAN CHEMICAL BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

The views and conclusions contained in the software and documentation are those of the authors and should not be interpreted as representing official policies, either expressed or implied, of Cayman Chemical Company, Inc.

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