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Driving Protein Crystallization and Rational Drug Design via Thermal Shift Assay
Case Study
Overview:
Cayman’s Structural Biology service group worked with a client to perform crystallization studies that delivered multiple high-resolution crystal structures of LpxC, an enzyme involved in Gram-negative bacteria pathogenicity, bound with lead inhibitors.
Thermal shift assay (TSA) protein formulation and cryoprotectant screening showed Mg2+ and tartrate to be effectively stabilizing for P. aeruginosa LpxC. Improved crystallization space and novel crystallization conditions were identified by TSA that enabled the co-crystallization of P. aeruginosa LpxC with inhibitor compounds.
Crystal structures determined the key interactions of the inhibitors in the P. aeruginosa LpxC binding pocket. These findings led to the discovery of a prodrug with high solubility and rapid conversion to active drug upon i.v. administration to treat P. aeruginosa infections.
The TSA-driven crystallization platform offered by Cayman enabled the client to rapidly advance their P. aeruginosa drug discovery program.
To cite this case study: Assar, Z., Holt, M.C., Schaub, J., et al. Driving protein crystallization and rational drug design via thermal shift assay. Case Study: Structural Biology Services, Cayman Chemical (2019).
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