A fluorescent cleavage product of CFDA-SE
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Alternative(s)
413426-CFSE
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5-CFSE

Item No. 16802

Technical Information
Formal Name
3',6'-dihydroxy-3-oxo-spiro[isobenzofuran-1(3H),9'-[9H]xanthene]-5-carboxylic acid, 2,5-dioxo-1-pyrrolidinyl ester
CAS Number
92557-80-7
Synonyms
  • 5-Carboxyfluorescein NHS ester
  • 5-Carboxyfluorescein-N-hydroxysuccinimide ester
  • 5-Carboxyfluorescein N-Succinimidyl ester
  • 5-FAM SE
  • 5-FAM N-succinimidyl ester
Molecular Formula
C25H15NO9
Formula Weight
Purity
≥95%
Emission
518 nm
Excitation
491 nm
A crystalline solid
DMF: 5 mg/mlDMSO: 10 mg/mlDMSO:PBS(pH7.2) (1:1): 0.5 mg/ml
λmax
215, 225, 475 nm
SMILES
OC1=CC=C(C2(C(C=CC(C(ON3C(CCC3=O)=O)=O)=C4)=C4C(O2)=O)C(C=CC(O)=C5)=C5O6)C6=C1
InChi Code
InChI=1S/C25H15NO9/c27-13-2-5-17-19(10-13)33-20-11-14(28)3-6-18(20)25(17)16-4-1-12(9-15(16)24(32)34-25)23(31)35-26-21(29)7-8-22(26)30/h1-6,9-11,27-28H,7-8H2
InChi Key
GECIDMICWWDIBO-UHFFFAOYSA-N
Shipping & Storage Information
Storage
-20°C
Shipping
Wet ice in continental US; may vary elsewhere
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    Product Description

    5-CFSE is a fluorescent product of CFDA-SE (Item No. 14456) cleavage by intracellular esterases.1 5-CFSE lacks the diacetate groups of CFDA-SE and, as a result, is less cell permeable. CFSE fluorescence is cytoplasmic, and it has excitation/emission maxima of 491 and 518 nm, respectively.2 It covalently couples to intracellular molecules via its succinimidyl group and can be retained within cells for at least eight weeks. The dilution of CFSE fluorescence resulting from cell division can be used to analyze cell proliferation.3 Its fluorescence can also be used to track cell migration in vivo.4

    WARNING This product is not for human or veterinary use.

    References & Product Citations
    Product Description References

    1. Breeuwer, P., Drocourt, J., Rombouts, F.M., et alA novel method for continuous determination of the intracellular pH in bacteria with the internally conjugated fluorescent probe 5 (and 6-)-carboxyfluorescein succinimidyl ester. Appl. Environ. Microbiol. 62(1), 178-183 (1996).

    2. Weston, S.A., and Parish, C.R. New fluorescent dyes for lymphocyte migration studies. Analysis by flow cytometry and fluorescence microscopy. J. Immunol. Methods 133(1), 87-97 (1990).

    3. Lyons, A.B. Analysing cell division in vivo and in vitro using flow cytometric measurement of CFSE dye dilution. J. Immunol. Methods 243(1-2), 147-154 (2000).

    4. Parish, C.R., Glidden, M.H., Quah, B.J.C., et alUse of the intracellular fluorescent dye CFSE to monitor lymphocyte migration and proliferation. Curr. Protoc. Immunol. Supp. 84, 4.9.1-4.9.13 (2009).